Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ClpbQ60649 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.5□□□□□ -0.41
ClpbQ60649 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ClpbQ60649 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
ClpbQ60649 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ClpbQ60649 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
ClpbQ60649 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ClpbQ60649 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ClpbQ60649 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ClpbQ60649 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ClpbQ60649 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ClpbQ60649 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ClpbQ60649 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.49□□□□□ -0.41
ClpbQ60649 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClpbQ60649 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.49□□□□□ -0.41
ClpbQ60649 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ClpbQ60649 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ClpbQ60649 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ClpbQ60649 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClpbQ60649 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClpbQ60649 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.49□□□□□ -0.41
ClpbQ60649 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClpbQ60649 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ClpbQ60649 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ClpbQ60649 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.48□□□□□ -0.41
ClpbQ60649 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
ClpbQ60649 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 Gm24196-201ENSMUST00000179161 110 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ClpbQ60649 Gm29649-201ENSMUST00000185649 419 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.48□□□□□ -0.41
ClpbQ60649 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.48□□□□□ -0.41
ClpbQ60649 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ClpbQ60649 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
ClpbQ60649 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
ClpbQ60649 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.48□□□□□ -0.41
ClpbQ60649 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.48□□□□□ -0.41
ClpbQ60649 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClpbQ60649 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms