Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gm6736-201ENSMUST00000166583 948 ntBASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gm38294-201ENSMUST00000192831 381 ntBASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gm9063-201ENSMUST00000223299 582 ntBASIC12.41□□□□□ -0.42
Nr1h4Q60641 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.41□□□□□ -0.42
Nr1h4Q60641 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nr1h4Q60641 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.4□□□□□ -0.42
Nr1h4Q60641 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Gm26308-201ENSMUST00000157768 69 ntBASIC12.4□□□□□ -0.42
Nr1h4Q60641 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.4□□□□□ -0.42
Nr1h4Q60641 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.4□□□□□ -0.42
Nr1h4Q60641 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.4□□□□□ -0.42
Nr1h4Q60641 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nr1h4Q60641 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nr1h4Q60641 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Nr1h4Q60641 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nr1h4Q60641 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nr1h4Q60641 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.39□□□□□ -0.43
Nr1h4Q60641 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Gm14701-201ENSMUST00000117156 348 ntBASIC12.39□□□□□ -0.43
Nr1h4Q60641 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms