Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm14350-201ENSMUST00000116642 640 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm12928-201ENSMUST00000117115 573 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm5687-201ENSMUST00000118252 640 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm6152-201ENSMUST00000151704 340 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm23984-201ENSMUST00000157139 203 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm2495-201ENSMUST00000191160 466 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gm16202-201ENSMUST00000117532 544 ntBASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gm14928-201ENSMUST00000120198 477 ntBASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav5d-4Q5R1F6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms