Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mir874-201ENSMUST00000104769 76 ntBASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Gm12795-201ENSMUST00000117594 539 ntBASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Gm8176-201ENSMUST00000191297 1099 ntBASIC22.5■■□□□ 1.19
Trim41Q5NCC3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim41Q5NCC3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Gm15276-201ENSMUST00000145953 498 ntBASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Gm31256-201ENSMUST00000194705 506 ntBASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Gm38092-201ENSMUST00000195600 653 ntBASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Gm44262-201ENSMUST00000204969 372 ntBASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Gm18730-201ENSMUST00000218038 343 ntBASIC22.49■■□□□ 1.19
Trim41Q5NCC3 AC132901.1-201ENSMUST00000224345 508 ntBASIC22.49■■□□□ 1.19
Trim41Q5NCC3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Gm8385-201ENSMUST00000058999 643 ntBASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Trim41Q5NCC3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Gm38116-201ENSMUST00000193873 1533 ntBASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Gm19963-201ENSMUST00000208413 1255 ntBASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 CT025694.1-201ENSMUST00000226188 934 ntBASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim41Q5NCC3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Gm3318-201ENSMUST00000217604 1183 ntBASIC22.47■■□□□ 1.19
Trim41Q5NCC3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim41Q5NCC3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms