Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm22877-201ENSMUST00000175451 105 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm18059-201ENSMUST00000208073 580 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm18463-201ENSMUST00000207258 474 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Gm18460-201ENSMUST00000208088 464 ntBASIC12.53□□□□□ -0.4
Vps13aQ5H8C4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vps13aQ5H8C4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm8199-201ENSMUST00000121323 823 ntBASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm37458-201ENSMUST00000194055 410 ntBASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm25998-201ENSMUST00000175397 53 ntBASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm42511-201ENSMUST00000196160 234 ntBASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms