Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fndc4Q3TR08 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fndc4Q3TR08 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm15770-201ENSMUST00000117498 584 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms