Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm29608-201ENSMUST00000190444 463 ntBASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm28631-201ENSMUST00000190740 334 ntBASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Gm7488-201ENSMUST00000117148 684 ntBASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43aQ3TL54 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43aQ3TL54 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43aQ3TL54 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43aQ3TL54 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43aQ3TL54 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.77□□□□□ -0.2
Trim43aQ3TL54 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.77□□□□□ -0.2
Trim43aQ3TL54 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
Trim43aQ3TL54 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms