Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Mir7221-201ENSMUST00000184009 72 ntBASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccbe1Q3MI99 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gm11764-201ENSMUST00000120221 623 ntBASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Ccbe1Q3MI99 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms