Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Gm25668-201ENSMUST00000157700 129 ntBASIC12.46□□□□□ -0.41
Hoxc4Q08624 Gm2546-201ENSMUST00000182630 991 ntBASIC12.46□□□□□ -0.41
Hoxc4Q08624 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.46□□□□□ -0.41
Hoxc4Q08624 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.46□□□□□ -0.42
Hoxc4Q08624 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc4Q08624 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Hoxc4Q08624 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm13736-201ENSMUST00000119272 253 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm8018-201ENSMUST00000173536 789 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm44405-201ENSMUST00000198952 126 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm5950-201ENSMUST00000213337 772 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm30285-201ENSMUST00000214614 422 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm18041-201ENSMUST00000218210 618 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.45□□□□□ -0.42
Hoxc4Q08624 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc4Q08624 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.44□□□□□ -0.42
Hoxc4Q08624 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Hoxc4Q08624 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.44□□□□□ -0.42
Hoxc4Q08624 Gm4857-201ENSMUST00000192718 785 ntBASIC12.44□□□□□ -0.42
Hoxc4Q08624 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.44□□□□□ -0.42
Hoxc4Q08624 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc4Q08624 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms