Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdx4Q07424 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdx4Q07424 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cdx4Q07424 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdx4Q07424 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.07□□□□□ -0.8
Cdx4Q07424 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm12928-201ENSMUST00000117115 573 ntBASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.07□□□□□ -0.8
Cdx4Q07424 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.07□□□□□ -0.8
Cdx4Q07424 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdx4Q07424 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm38223-201ENSMUST00000194484 695 ntBASIC10.07□□□□□ -0.8
Cdx4Q07424 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.07□□□□□ -0.8
Cdx4Q07424 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.07□□□□□ -0.8
Cdx4Q07424 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx4Q07424 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Mir874-201ENSMUST00000104769 76 ntBASIC10.06□□□□□ -0.8
Cdx4Q07424 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.06□□□□□ -0.8
Cdx4Q07424 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Gm6983-201ENSMUST00000214912 628 ntBASIC10.06□□□□□ -0.8
Cdx4Q07424 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Cdx4Q07424 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx4Q07424 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms