Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm28205-201ENSMUST00000189177 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm3332-201ENSMUST00000189337 928 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm29032-201ENSMUST00000189797 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm28695-201ENSMUST00000190300 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm37448-201ENSMUST00000192795 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm44237-201ENSMUST00000205183 936 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm45259-201ENSMUST00000209217 1006 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm2517-201ENSMUST00000215651 348 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 AC153544.1-201ENSMUST00000217988 400 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC12.89□□□□□ -0.35
Col9a1Q05722 AC174797.4-201ENSMUST00000225510 347 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.88□□□□□ -0.35
Col9a1Q05722 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm20778-201ENSMUST00000178524 627 ntBASIC12.88□□□□□ -0.35
Col9a1Q05722 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.88□□□□□ -0.35
Col9a1Q05722 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm7238-201ENSMUST00000206467 973 ntBASIC12.88□□□□□ -0.35
Col9a1Q05722 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.88□□□□□ -0.35
Col9a1Q05722 AC153801.1-201ENSMUST00000217904 947 ntBASIC12.88□□□□□ -0.35
Col9a1Q05722 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.88□□□□□ -0.35
Col9a1Q05722 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.88□□□□□ -0.35
Col9a1Q05722 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a1Q05722 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col9a1Q05722 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm16202-201ENSMUST00000117532 544 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm11941-201ENSMUST00000119904 610 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm11246-201ENSMUST00000120880 345 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm14603-201ENSMUST00000121275 448 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm12783-201ENSMUST00000121425 397 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm7985-201ENSMUST00000183329 981 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm37246-201ENSMUST00000192665 835 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms