Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm11591-201ENSMUST00000120063 702 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm16379-201ENSMUST00000161469 348 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm8762-201ENSMUST00000193486 339 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm43133-201ENSMUST00000197472 463 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.98□□□□□ -0.33
Col6a2Q02788 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col6a2Q02788 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a2Q02788 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col6a2Q02788 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a2Q02788 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Gm7809-201ENSMUST00000153199 742 ntBASIC12.97□□□□□ -0.33
Col6a2Q02788 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.97□□□□□ -0.33
Col6a2Q02788 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a2Q02788 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.97□□□□□ -0.33
Col6a2Q02788 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.97□□□□□ -0.33
Col6a2Q02788 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Col6a2Q02788 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a2Q02788 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a2Q02788 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a2Q02788 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 Gm27516-201ENSMUST00000184237 98 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.96□□□□□ -0.33
Col6a2Q02788 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a2Q02788 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Col6a2Q02788 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.96□□□□□ -0.34
Col6a2Q02788 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms