Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.88□□□□□ -0.51
Scn1bP97952 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Scn1bP97952 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.88□□□□□ -0.51
Scn1bP97952 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn1bP97952 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.87□□□□□ -0.51
Scn1bP97952 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.87□□□□□ -0.51
Scn1bP97952 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.87□□□□□ -0.51
Scn1bP97952 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Gm13823-201ENSMUST00000119930 345 ntBASIC11.87□□□□□ -0.51
Scn1bP97952 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.87□□□□□ -0.51
Scn1bP97952 Gm27397-201ENSMUST00000184997 107 ntBASIC11.87□□□□□ -0.51
Scn1bP97952 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.87□□□□□ -0.51
Scn1bP97952 Gm43125-201ENSMUST00000201724 730 ntBASIC11.87□□□□□ -0.51
Scn1bP97952 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.87□□□□□ -0.51
Scn1bP97952 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.87□□□□□ -0.51
Scn1bP97952 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Scn1bP97952 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Scn1bP97952 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Scn1bP97952 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.87□□□□□ -0.51
Scn1bP97952 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.87□□□□□ -0.51
Scn1bP97952 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn1bP97952 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.86□□□□□ -0.51
Scn1bP97952 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Gm24513-201ENSMUST00000174964 138 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Gm44335-201ENSMUST00000196879 141 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 Gm44297-201ENSMUST00000198304 141 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 Gm44346-201ENSMUST00000198851 141 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.86□□□□□ -0.51
Scn1bP97952 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn1bP97952 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scn1bP97952 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms