Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.24□□□□□ -0.29
Thumpd3P97770 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Thumpd3P97770 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.24□□□□□ -0.29
Thumpd3P97770 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Thumpd3P97770 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.24□□□□□ -0.29
Thumpd3P97770 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Thumpd3P97770 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.24□□□□□ -0.29
Thumpd3P97770 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.24□□□□□ -0.29
Thumpd3P97770 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Thumpd3P97770 Gm8602-201ENSMUST00000184045 607 ntBASIC13.24□□□□□ -0.29
Thumpd3P97770 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Thumpd3P97770 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Thumpd3P97770 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Thumpd3P97770 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.23□□□□□ -0.29
Thumpd3P97770 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Gm12341-201ENSMUST00000119724 503 ntBASIC13.23□□□□□ -0.29
Thumpd3P97770 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Thumpd3P97770 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Gm5279-201ENSMUST00000199575 745 ntBASIC13.23□□□□□ -0.29
Thumpd3P97770 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.23□□□□□ -0.29
Thumpd3P97770 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.23□□□□□ -0.29
Thumpd3P97770 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
Thumpd3P97770 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.23□□□□□ -0.29
Thumpd3P97770 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Thumpd3P97770 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Thumpd3P97770 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Thumpd3P97770 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.23□□□□□ -0.29
Thumpd3P97770 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Thumpd3P97770 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.22□□□□□ -0.29
Thumpd3P97770 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.22□□□□□ -0.29
Thumpd3P97770 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Gm45841-201ENSMUST00000207700 164 ntBASIC13.22□□□□□ -0.29
Thumpd3P97770 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.22□□□□□ -0.29
Thumpd3P97770 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Thumpd3P97770 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd3P97770 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms