Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Gm11637-201ENSMUST00000120601 592 ntBASIC12.31□□□□□ -0.44
Nkx3-2P97503 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Gm45331-201ENSMUST00000209868 554 ntBASIC12.31□□□□□ -0.44
Nkx3-2P97503 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.31□□□□□ -0.44
Nkx3-2P97503 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.3□□□□□ -0.44
Nkx3-2P97503 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.3□□□□□ -0.44
Nkx3-2P97503 Gm6447-201ENSMUST00000118905 835 ntBASIC12.3□□□□□ -0.44
Nkx3-2P97503 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.3□□□□□ -0.44
Nkx3-2P97503 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkx3-2P97503 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx3-2P97503 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm6007-201ENSMUST00000208170 823 ntBASIC12.29□□□□□ -0.44
Nkx3-2P97503 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms