Protein–RNA interactions for Protein: P97460

Npas2, Neuronal PAS domain-containing protein 2, mousemouse

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas2P97460 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Mir6977-201ENSMUST00000184960 64 ntBASIC13.34□□□□□ -0.27
Npas2P97460 Gm44069-201ENSMUST00000204898 506 ntBASIC13.34□□□□□ -0.27
Npas2P97460 Gm18473-201ENSMUST00000220543 868 ntBASIC13.34□□□□□ -0.27
Npas2P97460 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.34□□□□□ -0.27
Npas2P97460 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Npas2P97460 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Npas2P97460 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.34□□□□□ -0.27
Npas2P97460 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas2P97460 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npas2P97460 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Npas2P97460 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Npas2P97460 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.33□□□□□ -0.27
Npas2P97460 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Npas2P97460 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Npas2P97460 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Npas2P97460 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Npas2P97460 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Gm7488-201ENSMUST00000117148 684 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Gm12859-201ENSMUST00000117834 427 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.33□□□□□ -0.28
Npas2P97460 Gm6152-201ENSMUST00000151704 340 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Gm27437-201ENSMUST00000183429 107 ntBASIC13.33□□□□□ -0.28
Npas2P97460 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Gm15823-201ENSMUST00000064305 670 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Npas2P97460 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.33□□□□□ -0.28
Npas2P97460 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.33□□□□□ -0.28
Npas2P97460 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas2P97460 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.33□□□□□ -0.28
Npas2P97460 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.32□□□□□ -0.28
Npas2P97460 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.32□□□□□ -0.28
Npas2P97460 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Npas2P97460 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.32□□□□□ -0.28
Npas2P97460 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.32□□□□□ -0.28
Npas2P97460 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Npas2P97460 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas2P97460 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Npas2P97460 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Npas2P97460 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas2P97460 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.31□□□□□ -0.28
Npas2P97460 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms