Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.91□□□□□ -0.66
Npas1P97459 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.91□□□□□ -0.66
Npas1P97459 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.91□□□□□ -0.66
Npas1P97459 Gm27494-201ENSMUST00000184735 189 ntBASIC10.91□□□□□ -0.66
Npas1P97459 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.91□□□□□ -0.66
Npas1P97459 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.91□□□□□ -0.66
Npas1P97459 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.91□□□□□ -0.66
Npas1P97459 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.91□□□□□ -0.66
Npas1P97459 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.91□□□□□ -0.66
Npas1P97459 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.91□□□□□ -0.66
Npas1P97459 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Npas1P97459 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Npas1P97459 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.9□□□□□ -0.66
Npas1P97459 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Npas1P97459 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.9□□□□□ -0.66
Npas1P97459 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.9□□□□□ -0.66
Npas1P97459 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Npas1P97459 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.9□□□□□ -0.66
Npas1P97459 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.9□□□□□ -0.66
Npas1P97459 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.9□□□□□ -0.66
Npas1P97459 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Gm43125-201ENSMUST00000201724 730 ntBASIC10.9□□□□□ -0.66
Npas1P97459 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.9□□□□□ -0.66
Npas1P97459 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Npas1P97459 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Npas1P97459 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.9□□□□□ -0.66
Npas1P97459 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.9□□□□□ -0.66
Npas1P97459 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.9□□□□□ -0.66
Npas1P97459 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Npas1P97459 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Npas1P97459 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Npas1P97459 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.9□□□□□ -0.67
Npas1P97459 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.9□□□□□ -0.67
Npas1P97459 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.9□□□□□ -0.67
Npas1P97459 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Npas1P97459 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.9□□□□□ -0.67
Npas1P97459 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Npas1P97459 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Npas1P97459 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Npas1P97459 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Npas1P97459 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Npas1P97459 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.89□□□□□ -0.67
Npas1P97459 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms