Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.24■□□□□ 0.19
Nkx2-3P97334 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nkx2-3P97334 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-3P97334 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.23■□□□□ 0.19
Nkx2-3P97334 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Gm27552-201ENSMUST00000183351 62 ntBASIC16.23■□□□□ 0.19
Nkx2-3P97334 Gm27844-201ENSMUST00000183613 62 ntBASIC16.23■□□□□ 0.19
Nkx2-3P97334 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.23■□□□□ 0.19
Nkx2-3P97334 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-3P97334 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Gm6963-201ENSMUST00000147879 379 ntBASIC16.22■□□□□ 0.19
Nkx2-3P97334 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 AC153961.1-201ENSMUST00000217760 385 ntBASIC16.22■□□□□ 0.19
Nkx2-3P97334 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.22■□□□□ 0.19
Nkx2-3P97334 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Nkx2-3P97334 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.21■□□□□ 0.19
Nkx2-3P97334 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.21■□□□□ 0.19
Nkx2-3P97334 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.21■□□□□ 0.19
Nkx2-3P97334 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Gm24749-201ENSMUST00000157838 343 ntBASIC16.21■□□□□ 0.19
Nkx2-3P97334 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.21■□□□□ 0.19
Nkx2-3P97334 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Nsd1-205ENSMUST00000224693 852 ntBASIC16.21■□□□□ 0.19
Nkx2-3P97334 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-3P97334 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx2-3P97334 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx2-3P97334 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx2-3P97334 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx2-3P97334 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx2-3P97334 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-3P97334 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx2-3P97334 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms