Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
H3f3aP84244 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
H3f3aP84244 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
H3f3aP84244 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H3f3aP84244 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
H3f3aP84244 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
H3f3aP84244 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
H3f3aP84244 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.58□□□□□ -0.56
H3f3aP84244 Gm4984-201ENSMUST00000115987 360 ntBASIC11.58□□□□□ -0.56
H3f3aP84244 Gm13829-201ENSMUST00000119600 138 ntBASIC11.58□□□□□ -0.56
H3f3aP84244 Gm16177-201ENSMUST00000120728 718 ntBASIC11.58□□□□□ -0.56
H3f3aP84244 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.58□□□□□ -0.56
H3f3aP84244 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.58□□□□□ -0.56
H3f3aP84244 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.58□□□□□ -0.56
H3f3aP84244 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.58□□□□□ -0.56
H3f3aP84244 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Gm6458-201ENSMUST00000211573 635 ntBASIC11.58□□□□□ -0.56
H3f3aP84244 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.58□□□□□ -0.56
H3f3aP84244 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.58□□□□□ -0.56
H3f3aP84244 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
H3f3aP84244 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.58□□□□□ -0.56
H3f3aP84244 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H3f3aP84244 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.57□□□□□ -0.56
H3f3aP84244 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
H3f3aP84244 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
H3f3aP84244 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.57□□□□□ -0.56
H3f3aP84244 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.57□□□□□ -0.56
H3f3aP84244 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Gm6266-201ENSMUST00000203844 806 ntBASIC11.57□□□□□ -0.56
H3f3aP84244 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.57□□□□□ -0.56
H3f3aP84244 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.57□□□□□ -0.56
H3f3aP84244 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Gm10146-201ENSMUST00000072739 309 ntBASIC11.57□□□□□ -0.56
H3f3aP84244 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.57□□□□□ -0.56
H3f3aP84244 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms