Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
SgcaP82350 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SgcaP82350 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.9□□□□□ -0.66
SgcaP82350 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SgcaP82350 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 Gm13385-201ENSMUST00000121089 220 ntBASIC10.9□□□□□ -0.66
SgcaP82350 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcaP82350 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.9□□□□□ -0.66
SgcaP82350 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcaP82350 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.9□□□□□ -0.66
SgcaP82350 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcaP82350 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcaP82350 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SgcaP82350 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SgcaP82350 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcaP82350 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcaP82350 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcaP82350 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcaP82350 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcaP82350 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SgcaP82350 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SgcaP82350 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SgcaP82350 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
SgcaP82350 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.89□□□□□ -0.67
SgcaP82350 Gm15460-201ENSMUST00000118147 391 ntBASIC10.89□□□□□ -0.67
SgcaP82350 Gm11745-201ENSMUST00000121669 448 ntBASIC10.89□□□□□ -0.67
SgcaP82350 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.89□□□□□ -0.67
SgcaP82350 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.89□□□□□ -0.67
SgcaP82350 Gm9824-201ENSMUST00000178707 561 ntBASIC10.89□□□□□ -0.67
SgcaP82350 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Mir7221-201ENSMUST00000184009 72 ntBASIC10.89□□□□□ -0.67
SgcaP82350 Gm45841-201ENSMUST00000207700 164 ntBASIC10.89□□□□□ -0.67
SgcaP82350 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.89□□□□□ -0.67
SgcaP82350 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SgcaP82350 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms