Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.62□□□□□ -0.55
SgcbP82349 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcbP82349 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SgcbP82349 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcbP82349 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.61□□□□□ -0.55
SgcbP82349 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SgcbP82349 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
SgcbP82349 Gm12384-201ENSMUST00000119228 919 ntBASIC11.61□□□□□ -0.55
SgcbP82349 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.61□□□□□ -0.55
SgcbP82349 Gm13123-201ENSMUST00000122173 492 ntBASIC11.61□□□□□ -0.55
SgcbP82349 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.61□□□□□ -0.55
SgcbP82349 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SgcbP82349 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.61□□□□□ -0.55
SgcbP82349 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.61□□□□□ -0.55
SgcbP82349 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.61□□□□□ -0.55
SgcbP82349 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
SgcbP82349 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SgcbP82349 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SgcbP82349 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.61□□□□□ -0.55
SgcbP82349 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SgcbP82349 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcbP82349 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SgcbP82349 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.6□□□□□ -0.55
SgcbP82349 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.6□□□□□ -0.55
SgcbP82349 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SgcbP82349 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.6□□□□□ -0.55
SgcbP82349 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
SgcbP82349 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms