Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.1□□□□□ -0.47
SgcdP82347 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.1□□□□□ -0.47
SgcdP82347 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.1□□□□□ -0.47
SgcdP82347 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SgcdP82347 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.1□□□□□ -0.47
SgcdP82347 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
SgcdP82347 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
SgcdP82347 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.09□□□□□ -0.47
SgcdP82347 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Gm27533-201ENSMUST00000183800 152 ntBASIC12.09□□□□□ -0.47
SgcdP82347 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.09□□□□□ -0.47
SgcdP82347 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.09□□□□□ -0.47
SgcdP82347 Gm37714-201ENSMUST00000194742 342 ntBASIC12.09□□□□□ -0.47
SgcdP82347 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.09□□□□□ -0.47
SgcdP82347 Gm6218-201ENSMUST00000219812 628 ntBASIC12.09□□□□□ -0.47
SgcdP82347 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.09□□□□□ -0.47
SgcdP82347 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SgcdP82347 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SgcdP82347 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SgcdP82347 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcdP82347 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.08□□□□□ -0.47
SgcdP82347 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SgcdP82347 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SgcdP82347 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SgcdP82347 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SgcdP82347 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcdP82347 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.08□□□□□ -0.48
SgcdP82347 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.08□□□□□ -0.48
SgcdP82347 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SgcdP82347 Gm11478-201ENSMUST00000117851 599 ntBASIC12.08□□□□□ -0.48
SgcdP82347 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcdP82347 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gm6745-201ENSMUST00000199216 526 ntBASIC12.08□□□□□ -0.48
SgcdP82347 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gm7775-201ENSMUST00000218871 853 ntBASIC12.08□□□□□ -0.48
SgcdP82347 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SgcdP82347 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SgcdP82347 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SgcdP82347 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SgcdP82347 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcdP82347 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.08□□□□□ -0.48
SgcdP82347 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcdP82347 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.08□□□□□ -0.48
SgcdP82347 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcdP82347 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcdP82347 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.07□□□□□ -0.48
SgcdP82347 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SgcdP82347 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcdP82347 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms