Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Mir6977-201ENSMUST00000184960 64 ntBASIC11.26□□□□□ -0.61
Atf1P81269 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.26□□□□□ -0.61
Atf1P81269 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Atf1P81269 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Atf1P81269 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.26□□□□□ -0.61
Atf1P81269 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.26□□□□□ -0.61
Atf1P81269 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf1P81269 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Atf1P81269 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Atf1P81269 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Atf1P81269 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Gm14350-201ENSMUST00000116642 640 ntBASIC11.25□□□□□ -0.61
Atf1P81269 Gm7488-201ENSMUST00000117148 684 ntBASIC11.25□□□□□ -0.61
Atf1P81269 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.25□□□□□ -0.61
Atf1P81269 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Atf1P81269 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.25□□□□□ -0.61
Atf1P81269 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.25□□□□□ -0.61
Atf1P81269 Gm27437-201ENSMUST00000183429 107 ntBASIC11.25□□□□□ -0.61
Atf1P81269 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Atf1P81269 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.25□□□□□ -0.61
Atf1P81269 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.25□□□□□ -0.61
Atf1P81269 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.25□□□□□ -0.61
Atf1P81269 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Gm2423-201ENSMUST00000074863 733 ntBASIC11.25□□□□□ -0.61
Atf1P81269 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.25□□□□□ -0.61
Atf1P81269 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Atf1P81269 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Atf1P81269 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf1P81269 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.24□□□□□ -0.61
Atf1P81269 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.24□□□□□ -0.61
Atf1P81269 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.24□□□□□ -0.61
Atf1P81269 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Atf1P81269 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.24□□□□□ -0.61
Atf1P81269 Gm16202-201ENSMUST00000117532 544 ntBASIC11.24□□□□□ -0.61
Atf1P81269 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.24□□□□□ -0.61
Atf1P81269 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Atf1P81269 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.24□□□□□ -0.61
Atf1P81269 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.24□□□□□ -0.61
Atf1P81269 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf1P81269 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.23□□□□□ -0.61
Atf1P81269 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.23□□□□□ -0.61
Atf1P81269 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Atf1P81269 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.23□□□□□ -0.61
Atf1P81269 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms