Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smad1P70340 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smad1P70340 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.41□□□□□ -0.26
Smad1P70340 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Smad1P70340 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smad1P70340 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smad1P70340 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smad1P70340 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Gm15198-201ENSMUST00000117283 177 ntBASIC13.41□□□□□ -0.26
Smad1P70340 Gm11814-201ENSMUST00000119515 929 ntBASIC13.41□□□□□ -0.26
Smad1P70340 Gm14660-201ENSMUST00000119809 575 ntBASIC13.41□□□□□ -0.26
Smad1P70340 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.41□□□□□ -0.26
Smad1P70340 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Smad1P70340 Gm2495-201ENSMUST00000191160 466 ntBASIC13.41□□□□□ -0.26
Smad1P70340 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.41□□□□□ -0.26
Smad1P70340 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.41□□□□□ -0.26
Smad1P70340 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smad1P70340 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.41□□□□□ -0.26
Smad1P70340 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.41□□□□□ -0.26
Smad1P70340 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smad1P70340 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.41□□□□□ -0.26
Smad1P70340 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.41□□□□□ -0.26
Smad1P70340 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.41□□□□□ -0.26
Smad1P70340 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Smad1P70340 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.41□□□□□ -0.26
Smad1P70340 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smad1P70340 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.4□□□□□ -0.26
Smad1P70340 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.4□□□□□ -0.26
Smad1P70340 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.4□□□□□ -0.26
Smad1P70340 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smad1P70340 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Smad1P70340 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.4□□□□□ -0.26
Smad1P70340 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.4□□□□□ -0.26
Smad1P70340 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Gm27772-201ENSMUST00000184900 187 ntBASIC13.4□□□□□ -0.26
Smad1P70340 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Gm9257-201ENSMUST00000221254 232 ntBASIC13.4□□□□□ -0.26
Smad1P70340 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smad1P70340 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smad1P70340 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smad1P70340 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Smad1P70340 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smad1P70340 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.39□□□□□ -0.27
Smad1P70340 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smad1P70340 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Smad1P70340 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smad1P70340 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smad1P70340 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms