Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC20.82■□□□□ 0.92
Cux2P70298 Gm23119-201ENSMUST00000158610 140 ntBASIC20.82■□□□□ 0.92
Cux2P70298 Gm6485-201ENSMUST00000160676 439 ntBASIC20.82■□□□□ 0.92
Cux2P70298 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC20.82■□□□□ 0.92
Cux2P70298 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
Cux2P70298 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC20.82■□□□□ 0.92
Cux2P70298 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cux2P70298 Gm5989-201ENSMUST00000096092 2077 ntBASIC20.82■□□□□ 0.92
Cux2P70298 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cux2P70298 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Cux2P70298 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC20.82■□□□□ 0.92
Cux2P70298 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC20.81■□□□□ 0.92
Cux2P70298 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC20.81■□□□□ 0.92
Cux2P70298 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC20.81■□□□□ 0.92
Cux2P70298 Gm42657-201ENSMUST00000201746 211 ntBASIC20.81■□□□□ 0.92
Cux2P70298 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Gm9111-201ENSMUST00000219394 709 ntBASIC20.81■□□□□ 0.92
Cux2P70298 AC140375.1-201ENSMUST00000225421 694 ntBASIC20.81■□□□□ 0.92
Cux2P70298 Mir483-201ENSMUST00000093631 73 ntBASIC20.81■□□□□ 0.92
Cux2P70298 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC20.81■□□□□ 0.92
Cux2P70298 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Cux2P70298 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cux2P70298 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Gm13182-201ENSMUST00000122241 312 ntBASIC20.8■□□□□ 0.92
Cux2P70298 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Gm45120-201ENSMUST00000208880 408 ntBASIC20.8■□□□□ 0.92
Cux2P70298 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
Cux2P70298 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cux2P70298 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC20.8■□□□□ 0.92
Cux2P70298 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cux2P70298 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC20.8■□□□□ 0.92
Cux2P70298 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cux2P70298 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Gm11949-201ENSMUST00000117640 372 ntBASIC20.79■□□□□ 0.92
Cux2P70298 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Gm44552-201ENSMUST00000205458 1247 ntBASIC20.79■□□□□ 0.92
Cux2P70298 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC20.79■□□□□ 0.92
Cux2P70298 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC20.79■□□□□ 0.92
Cux2P70298 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cux2P70298 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cux2P70298 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Gm15352-201ENSMUST00000118696 270 ntBASIC20.78■□□□□ 0.92
Cux2P70298 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC20.78■□□□□ 0.92
Cux2P70298 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cux2P70298 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Gm10729-202ENSMUST00000193403 1375 ntBASIC20.78■□□□□ 0.92
Cux2P70298 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cux2P70298 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms