Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Eif3eP60229 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Eif3eP60229 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Eif3eP60229 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.42□□□□□ -0.26
Eif3eP60229 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.42□□□□□ -0.26
Eif3eP60229 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.42□□□□□ -0.26
Eif3eP60229 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Eif3eP60229 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.41□□□□□ -0.26
Eif3eP60229 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Eif3eP60229 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.41□□□□□ -0.26
Eif3eP60229 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Eif3eP60229 Gm16202-201ENSMUST00000117532 544 ntBASIC13.41□□□□□ -0.26
Eif3eP60229 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.41□□□□□ -0.26
Eif3eP60229 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.41□□□□□ -0.26
Eif3eP60229 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.41□□□□□ -0.26
Eif3eP60229 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.41□□□□□ -0.26
Eif3eP60229 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Eif3eP60229 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.41□□□□□ -0.26
Eif3eP60229 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.41□□□□□ -0.26
Eif3eP60229 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.41□□□□□ -0.26
Eif3eP60229 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Eif3eP60229 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.4□□□□□ -0.26
Eif3eP60229 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Eif3eP60229 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.4□□□□□ -0.26
Eif3eP60229 Gm6152-201ENSMUST00000151704 340 ntBASIC13.4□□□□□ -0.26
Eif3eP60229 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Gm5866-201ENSMUST00000177881 973 ntBASIC13.4□□□□□ -0.26
Eif3eP60229 Gm44069-201ENSMUST00000204898 506 ntBASIC13.4□□□□□ -0.26
Eif3eP60229 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.4□□□□□ -0.26
Eif3eP60229 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.4□□□□□ -0.26
Eif3eP60229 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.4□□□□□ -0.26
Eif3eP60229 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Eif3eP60229 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eif3eP60229 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Eif3eP60229 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Eif3eP60229 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Eif3eP60229 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Eif3eP60229 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Eif3eP60229 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Eif3eP60229 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Eif3eP60229 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Eif3eP60229 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eif3eP60229 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms