Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Nub1P54729 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nub1P54729 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nub1P54729 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nub1P54729 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nub1P54729 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nub1P54729 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.02□□□□□ -0.17
Nub1P54729 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.02□□□□□ -0.17
Nub1P54729 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Gm11618-201ENSMUST00000117946 267 ntBASIC14.02□□□□□ -0.17
Nub1P54729 Gm12203-201ENSMUST00000118235 598 ntBASIC14.02□□□□□ -0.17
Nub1P54729 Gm12209-201ENSMUST00000120089 596 ntBASIC14.02□□□□□ -0.17
Nub1P54729 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.02□□□□□ -0.17
Nub1P54729 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.02□□□□□ -0.17
Nub1P54729 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.02□□□□□ -0.17
Nub1P54729 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.02□□□□□ -0.17
Nub1P54729 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.02□□□□□ -0.17
Nub1P54729 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.02□□□□□ -0.17
Nub1P54729 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Gm6091-201ENSMUST00000098307 165 ntBASIC14.02□□□□□ -0.17
Nub1P54729 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nub1P54729 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.02□□□□□ -0.17
Nub1P54729 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.02□□□□□ -0.17
Nub1P54729 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.02□□□□□ -0.17
Nub1P54729 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nub1P54729 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nub1P54729 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.01□□□□□ -0.17
Nub1P54729 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Gm13123-201ENSMUST00000122173 492 ntBASIC14.01□□□□□ -0.17
Nub1P54729 Gm22331-201ENSMUST00000158066 136 ntBASIC14.01□□□□□ -0.17
Nub1P54729 Gm27847-201ENSMUST00000183711 107 ntBASIC14.01□□□□□ -0.17
Nub1P54729 Gm27375-201ENSMUST00000183799 107 ntBASIC14.01□□□□□ -0.17
Nub1P54729 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.01□□□□□ -0.17
Nub1P54729 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.01□□□□□ -0.17
Nub1P54729 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Gm19931-201ENSMUST00000198920 368 ntBASIC14.01□□□□□ -0.17
Nub1P54729 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.01□□□□□ -0.17
Nub1P54729 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nub1P54729 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nub1P54729 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nub1P54729 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14□□□□□ -0.17
Nub1P54729 Gm17150-201ENSMUST00000165577 381 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms