Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13□□□□□ -0.33
Fdft1P53798 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Fdft1P53798 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Fdft1P53798 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Gm6161-201ENSMUST00000121942 1102 ntBASIC13□□□□□ -0.33
Fdft1P53798 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13□□□□□ -0.33
Fdft1P53798 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13□□□□□ -0.33
Fdft1P53798 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13□□□□□ -0.33
Fdft1P53798 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13□□□□□ -0.33
Fdft1P53798 Gm15429-201ENSMUST00000151268 798 ntBASIC13□□□□□ -0.33
Fdft1P53798 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Fdft1P53798 Gm6254-201ENSMUST00000168178 1072 ntBASIC13□□□□□ -0.33
Fdft1P53798 Gm6153-201ENSMUST00000172004 1058 ntBASIC13□□□□□ -0.33
Fdft1P53798 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
Fdft1P53798 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13□□□□□ -0.33
Fdft1P53798 Gm5641-202ENSMUST00000198699 1080 ntBASIC13□□□□□ -0.33
Fdft1P53798 Gm7446-201ENSMUST00000221035 1240 ntBASIC13□□□□□ -0.33
Fdft1P53798 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13□□□□□ -0.33
Fdft1P53798 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13□□□□□ -0.33
Fdft1P53798 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Fdft1P53798 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13□□□□□ -0.33
Fdft1P53798 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fdft1P53798 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Fdft1P53798 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.99□□□□□ -0.33
Fdft1P53798 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.99□□□□□ -0.33
Fdft1P53798 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.99□□□□□ -0.33
Fdft1P53798 Gm6447-201ENSMUST00000118905 835 ntBASIC12.99□□□□□ -0.33
Fdft1P53798 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.99□□□□□ -0.33
Fdft1P53798 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Gm44397-201ENSMUST00000195950 113 ntBASIC12.99□□□□□ -0.33
Fdft1P53798 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Fdft1P53798 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.99□□□□□ -0.33
Fdft1P53798 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Fdft1P53798 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fdft1P53798 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.99□□□□□ -0.33
Fdft1P53798 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Fdft1P53798 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.98□□□□□ -0.33
Fdft1P53798 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms