Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.48□□□□□ -0.41
Sox3P53784 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox3P53784 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox3P53784 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox3P53784 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox3P53784 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox3P53784 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox3P53784 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox3P53784 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox3P53784 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sox3P53784 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox3P53784 Gm12203-201ENSMUST00000118235 598 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Gm12209-201ENSMUST00000120089 596 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Gm14381-201ENSMUST00000122105 414 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.47□□□□□ -0.41
Sox3P53784 Gm25668-201ENSMUST00000157700 129 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Gm24420-201ENSMUST00000176676 59 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Gm6082-201ENSMUST00000215204 454 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Gm5161-201ENSMUST00000075243 853 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox3P53784 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sox3P53784 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox3P53784 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.47□□□□□ -0.41
Sox3P53784 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox3P53784 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox3P53784 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox3P53784 Gm24514-201ENSMUST00000174961 285 ntBASIC12.46□□□□□ -0.41
Sox3P53784 Gm2445-201ENSMUST00000182798 989 ntBASIC12.46□□□□□ -0.41
Sox3P53784 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.46□□□□□ -0.41
Sox3P53784 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Gm8227-201ENSMUST00000223306 571 ntBASIC12.46□□□□□ -0.41
Sox3P53784 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox3P53784 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sox3P53784 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Sox3P53784 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox3P53784 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox3P53784 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox3P53784 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox3P53784 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms