Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Gm19091-201ENSMUST00000208120 978 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.23□□□□□ -0.29
Sox1P53783 Gm45398-201ENSMUST00000210561 165 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Gm45598-202ENSMUST00000210719 986 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.23□□□□□ -0.29
Sox1P53783 Snora73b-201ENSMUST00000083419 205 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox1P53783 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox1P53783 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.22□□□□□ -0.29
Sox1P53783 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Sox1P53783 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Gm11941-201ENSMUST00000119904 610 ntBASIC13.22□□□□□ -0.29
Sox1P53783 Gm11978-201ENSMUST00000122315 466 ntBASIC13.22□□□□□ -0.29
Sox1P53783 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox1P53783 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox1P53783 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.22□□□□□ -0.29
Sox1P53783 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox1P53783 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox1P53783 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox1P53783 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.22□□□□□ -0.29
Sox1P53783 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox1P53783 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox1P53783 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.22□□□□□ -0.29
Sox1P53783 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.22□□□□□ -0.29
Sox1P53783 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox1P53783 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox1P53783 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox1P53783 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox1P53783 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox1P53783 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox1P53783 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.21□□□□□ -0.29
Sox1P53783 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox1P53783 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.21□□□□□ -0.29
Sox1P53783 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.21□□□□□ -0.29
Sox1P53783 AY036118-201ENSMUST00000200021 923 ntBASIC13.21□□□□□ -0.29
Sox1P53783 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.21□□□□□ -0.29
Sox1P53783 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.21□□□□□ -0.29
Sox1P53783 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox1P53783 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.21□□□□□ -0.29
Sox1P53783 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Sox1P53783 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sox1P53783 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.2□□□□□ -0.3
Sox1P53783 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox1P53783 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sox1P53783 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms