Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.32□□□□□ -0.44
RoraP51448 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.32□□□□□ -0.44
RoraP51448 Gm16379-201ENSMUST00000161469 348 ntBASIC12.32□□□□□ -0.44
RoraP51448 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Gm28693-202ENSMUST00000190758 331 ntBASIC12.32□□□□□ -0.44
RoraP51448 Gm8762-201ENSMUST00000193486 339 ntBASIC12.32□□□□□ -0.44
RoraP51448 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.32□□□□□ -0.44
RoraP51448 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RoraP51448 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.32□□□□□ -0.44
RoraP51448 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RoraP51448 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
RoraP51448 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.32□□□□□ -0.44
RoraP51448 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RoraP51448 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
RoraP51448 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RoraP51448 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.31□□□□□ -0.44
RoraP51448 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RoraP51448 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
RoraP51448 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.31□□□□□ -0.44
RoraP51448 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RoraP51448 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.31□□□□□ -0.44
RoraP51448 Gm11793-201ENSMUST00000120433 981 ntBASIC12.31□□□□□ -0.44
RoraP51448 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.31□□□□□ -0.44
RoraP51448 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.31□□□□□ -0.44
RoraP51448 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.31□□□□□ -0.44
RoraP51448 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.31□□□□□ -0.44
RoraP51448 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Gm6222-202ENSMUST00000182143 629 ntBASIC12.31□□□□□ -0.44
RoraP51448 Gm27501-201ENSMUST00000183599 107 ntBASIC12.31□□□□□ -0.44
RoraP51448 Mir8109-201ENSMUST00000184375 117 ntBASIC12.31□□□□□ -0.44
RoraP51448 Gm42627-201ENSMUST00000197347 224 ntBASIC12.31□□□□□ -0.44
RoraP51448 Gm45930-201ENSMUST00000221330 292 ntBASIC12.31□□□□□ -0.44
RoraP51448 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.31□□□□□ -0.44
RoraP51448 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.31□□□□□ -0.44
RoraP51448 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RoraP51448 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.31□□□□□ -0.44
RoraP51448 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RoraP51448 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RoraP51448 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RoraP51448 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RoraP51448 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RoraP51448 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RoraP51448 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.3□□□□□ -0.44
RoraP51448 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
RoraP51448 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.3□□□□□ -0.44
RoraP51448 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.3□□□□□ -0.44
RoraP51448 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.3□□□□□ -0.44
RoraP51448 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.3□□□□□ -0.44
RoraP51448 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.3□□□□□ -0.44
RoraP51448 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
RoraP51448 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.3□□□□□ -0.44
RoraP51448 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.3□□□□□ -0.44
RoraP51448 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.3□□□□□ -0.44
RoraP51448 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RoraP51448 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.3□□□□□ -0.44
RoraP51448 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RoraP51448 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms