Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TubP50586 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TubP50586 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
TubP50586 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TubP50586 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TubP50586 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.34□□□□□ -0.27
TubP50586 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TubP50586 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TubP50586 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.34□□□□□ -0.27
TubP50586 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TubP50586 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
TubP50586 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
TubP50586 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
TubP50586 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TubP50586 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TubP50586 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.33□□□□□ -0.28
TubP50586 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.33□□□□□ -0.28
TubP50586 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TubP50586 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.33□□□□□ -0.28
TubP50586 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.33□□□□□ -0.28
TubP50586 Gm14660-201ENSMUST00000119809 575 ntBASIC13.33□□□□□ -0.28
TubP50586 Gm11637-201ENSMUST00000120601 592 ntBASIC13.33□□□□□ -0.28
TubP50586 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.33□□□□□ -0.28
TubP50586 Gm27682-201ENSMUST00000183930 110 ntBASIC13.33□□□□□ -0.28
TubP50586 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TubP50586 Gm10268-201ENSMUST00000085340 555 ntBASIC13.33□□□□□ -0.28
TubP50586 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TubP50586 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TubP50586 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.33□□□□□ -0.28
TubP50586 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TubP50586 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TubP50586 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.32□□□□□ -0.28
TubP50586 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.32□□□□□ -0.28
TubP50586 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TubP50586 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.32□□□□□ -0.28
TubP50586 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.32□□□□□ -0.28
TubP50586 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.32□□□□□ -0.28
TubP50586 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.32□□□□□ -0.28
TubP50586 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Gm7029-201ENSMUST00000173226 450 ntBASIC13.32□□□□□ -0.28
TubP50586 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.32□□□□□ -0.28
TubP50586 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.32□□□□□ -0.28
TubP50586 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.32□□□□□ -0.28
TubP50586 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.32□□□□□ -0.28
TubP50586 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TubP50586 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TubP50586 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.31□□□□□ -0.28
TubP50586 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TubP50586 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TubP50586 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms