Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.74□□□□□ -0.21
Shmt1P50431 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.74□□□□□ -0.21
Shmt1P50431 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.74□□□□□ -0.21
Shmt1P50431 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.74□□□□□ -0.21
Shmt1P50431 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Gm22121-201ENSMUST00000175148 54 ntBASIC13.74□□□□□ -0.21
Shmt1P50431 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Shmt1P50431 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.74□□□□□ -0.21
Shmt1P50431 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.74□□□□□ -0.21
Shmt1P50431 Gm43179-201ENSMUST00000198797 275 ntBASIC13.74□□□□□ -0.21
Shmt1P50431 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.74□□□□□ -0.21
Shmt1P50431 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shmt1P50431 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.73□□□□□ -0.21
Shmt1P50431 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.73□□□□□ -0.21
Shmt1P50431 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Shmt1P50431 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.73□□□□□ -0.21
Shmt1P50431 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Shmt1P50431 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.73□□□□□ -0.21
Shmt1P50431 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.73□□□□□ -0.21
Shmt1P50431 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Gm7809-201ENSMUST00000153199 742 ntBASIC13.73□□□□□ -0.21
Shmt1P50431 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.73□□□□□ -0.21
Shmt1P50431 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.73□□□□□ -0.21
Shmt1P50431 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shmt1P50431 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shmt1P50431 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.73□□□□□ -0.21
Shmt1P50431 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shmt1P50431 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shmt1P50431 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.73□□□□□ -0.21
Shmt1P50431 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shmt1P50431 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shmt1P50431 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.72□□□□□ -0.21
Shmt1P50431 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shmt1P50431 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Shmt1P50431 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Shmt1P50431 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shmt1P50431 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.72□□□□□ -0.21
Shmt1P50431 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.72□□□□□ -0.21
Shmt1P50431 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.72□□□□□ -0.21
Shmt1P50431 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.72□□□□□ -0.21
Shmt1P50431 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms