Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm26315-201ENSMUST00000083890 321 ntBASIC13.31□□□□□ -0.28
SftpbP50405 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SftpbP50405 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SftpbP50405 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.3□□□□□ -0.28
SftpbP50405 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.3□□□□□ -0.28
SftpbP50405 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SftpbP50405 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SftpbP50405 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SftpbP50405 Gm22189-201ENSMUST00000103822 86 ntBASIC13.3□□□□□ -0.28
SftpbP50405 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.3□□□□□ -0.28
SftpbP50405 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
SftpbP50405 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Gm44872-201ENSMUST00000207864 420 ntBASIC13.3□□□□□ -0.28
SftpbP50405 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.3□□□□□ -0.28
SftpbP50405 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SftpbP50405 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SftpbP50405 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.3□□□□□ -0.28
SftpbP50405 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SftpbP50405 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SftpbP50405 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.29□□□□□ -0.28
SftpbP50405 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.29□□□□□ -0.28
SftpbP50405 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.29□□□□□ -0.28
SftpbP50405 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.29□□□□□ -0.28
SftpbP50405 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SftpbP50405 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.29□□□□□ -0.28
SftpbP50405 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.29□□□□□ -0.28
SftpbP50405 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.29□□□□□ -0.28
SftpbP50405 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SftpbP50405 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.28□□□□□ -0.28
SftpbP50405 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Gm13689-201ENSMUST00000119360 685 ntBASIC13.28□□□□□ -0.28
SftpbP50405 Gm5354-201ENSMUST00000182417 973 ntBASIC13.28□□□□□ -0.28
SftpbP50405 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.28□□□□□ -0.28
SftpbP50405 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.28□□□□□ -0.28
SftpbP50405 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms