Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.42□□□□□ -0.58
GdnfP48540 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.42□□□□□ -0.58
GdnfP48540 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.42□□□□□ -0.58
GdnfP48540 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.42□□□□□ -0.58
GdnfP48540 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.42□□□□□ -0.58
GdnfP48540 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
GdnfP48540 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.41□□□□□ -0.58
GdnfP48540 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Gm16215-201ENSMUST00000161990 637 ntBASIC11.41□□□□□ -0.58
GdnfP48540 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.41□□□□□ -0.58
GdnfP48540 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.41□□□□□ -0.58
GdnfP48540 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.41□□□□□ -0.58
GdnfP48540 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.41□□□□□ -0.58
GdnfP48540 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
GdnfP48540 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
GdnfP48540 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
GdnfP48540 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.4□□□□□ -0.58
GdnfP48540 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
GdnfP48540 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Gm6912-201ENSMUST00000117218 544 ntBASIC11.4□□□□□ -0.58
GdnfP48540 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.4□□□□□ -0.58
GdnfP48540 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
GdnfP48540 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
GdnfP48540 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
GdnfP48540 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.4□□□□□ -0.58
GdnfP48540 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.4□□□□□ -0.58
GdnfP48540 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.4□□□□□ -0.58
GdnfP48540 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.4□□□□□ -0.58
GdnfP48540 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.4□□□□□ -0.58
GdnfP48540 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.4□□□□□ -0.58
GdnfP48540 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.4□□□□□ -0.58
GdnfP48540 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
GdnfP48540 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.4□□□□□ -0.58
GdnfP48540 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms