Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.5□□□□□ -0.41
Prox1P48437 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.5□□□□□ -0.41
Prox1P48437 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Prox1P48437 Gm27321-201ENSMUST00000185021 205 ntBASIC12.5□□□□□ -0.41
Prox1P48437 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Prox1P48437 Gm44344-201ENSMUST00000200287 129 ntBASIC12.5□□□□□ -0.41
Prox1P48437 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.5□□□□□ -0.41
Prox1P48437 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Prox1P48437 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Prox1P48437 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Prox1P48437 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Prox1P48437 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Prox1P48437 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Prox1P48437 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.49□□□□□ -0.41
Prox1P48437 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Prox1P48437 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.49□□□□□ -0.41
Prox1P48437 Gm14767-201ENSMUST00000121559 586 ntBASIC12.49□□□□□ -0.41
Prox1P48437 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Prox1P48437 Gm27772-201ENSMUST00000184900 187 ntBASIC12.49□□□□□ -0.41
Prox1P48437 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.49□□□□□ -0.41
Prox1P48437 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.49□□□□□ -0.41
Prox1P48437 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prox1P48437 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.49□□□□□ -0.41
Prox1P48437 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prox1P48437 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Prox1P48437 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.48□□□□□ -0.41
Prox1P48437 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Prox1P48437 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Prox1P48437 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms