Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Gm24255-201ENSMUST00000104481 128 ntBASIC12.3□□□□□ -0.44
Nkx2-6P43688 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Gm11222-201ENSMUST00000119005 738 ntBASIC12.3□□□□□ -0.44
Nkx2-6P43688 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.3□□□□□ -0.44
Nkx2-6P43688 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Gm38241-201ENSMUST00000192641 898 ntBASIC12.3□□□□□ -0.44
Nkx2-6P43688 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.3□□□□□ -0.44
Nkx2-6P43688 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-6P43688 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Gm27243-201ENSMUST00000183964 521 ntBASIC12.29□□□□□ -0.44
Nkx2-6P43688 Gm37489-201ENSMUST00000191883 159 ntBASIC12.29□□□□□ -0.44
Nkx2-6P43688 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-6P43688 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.28□□□□□ -0.44
Nkx2-6P43688 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm11964-201ENSMUST00000120982 444 ntBASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.28□□□□□ -0.44
Nkx2-6P43688 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm6621-201ENSMUST00000193251 772 ntBASIC12.28□□□□□ -0.44
Nkx2-6P43688 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.28□□□□□ -0.44
Nkx2-6P43688 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms