Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.55□□□□□ -0.4
Tnfsf4P43488 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Gm13689-201ENSMUST00000119360 685 ntBASIC12.55□□□□□ -0.4
Tnfsf4P43488 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf4P43488 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gm42612-201ENSMUST00000197986 623 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gm43170-201ENSMUST00000199827 612 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gm44872-201ENSMUST00000207864 420 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf4P43488 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.54□□□□□ -0.4
Tnfsf4P43488 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf4P43488 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Gm15371-201ENSMUST00000117057 784 ntBASIC12.53□□□□□ -0.4
Tnfsf4P43488 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfsf4P43488 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.53□□□□□ -0.4
Tnfsf4P43488 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf4P43488 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.53□□□□□ -0.4
Tnfsf4P43488 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.53□□□□□ -0.4
Tnfsf4P43488 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf4P43488 Gm5867-201ENSMUST00000063197 592 ntBASIC12.53□□□□□ -0.4
Tnfsf4P43488 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms