Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.91□□□□□ -0.5
Nkx2-2P42586 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Gm26185-201ENSMUST00000157692 266 ntBASIC11.91□□□□□ -0.5
Nkx2-2P42586 Gm37042-201ENSMUST00000193816 581 ntBASIC11.91□□□□□ -0.5
Nkx2-2P42586 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.91□□□□□ -0.5
Nkx2-2P42586 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Gm22121-201ENSMUST00000175148 54 ntBASIC11.9□□□□□ -0.5
Nkx2-2P42586 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.9□□□□□ -0.5
Nkx2-2P42586 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-2P42586 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Nkx2-2P42586 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-2P42586 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-2P42586 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-2P42586 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-2P42586 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.89□□□□□ -0.51
Nkx2-2P42586 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-2P42586 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.89□□□□□ -0.51
Nkx2-2P42586 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Gm14704-201ENSMUST00000120300 874 ntBASIC11.89□□□□□ -0.51
Nkx2-2P42586 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.89□□□□□ -0.51
Nkx2-2P42586 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkx2-2P42586 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms