Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HmgclP38060 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
HmgclP38060 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HmgclP38060 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HmgclP38060 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HmgclP38060 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
HmgclP38060 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
HmgclP38060 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.81□□□□□ -0.36
HmgclP38060 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.81□□□□□ -0.36
HmgclP38060 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.81□□□□□ -0.36
HmgclP38060 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.81□□□□□ -0.36
HmgclP38060 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
HmgclP38060 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.81□□□□□ -0.36
HmgclP38060 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Gm10146-201ENSMUST00000072739 309 ntBASIC12.81□□□□□ -0.36
HmgclP38060 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HmgclP38060 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
HmgclP38060 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.81□□□□□ -0.36
HmgclP38060 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HmgclP38060 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HmgclP38060 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HmgclP38060 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.8□□□□□ -0.36
HmgclP38060 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.8□□□□□ -0.36
HmgclP38060 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.8□□□□□ -0.36
HmgclP38060 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.8□□□□□ -0.36
HmgclP38060 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.8□□□□□ -0.36
HmgclP38060 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HmgclP38060 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HmgclP38060 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.8□□□□□ -0.36
HmgclP38060 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HmgclP38060 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.8□□□□□ -0.36
HmgclP38060 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HmgclP38060 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.79□□□□□ -0.36
HmgclP38060 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
HmgclP38060 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.79□□□□□ -0.36
HmgclP38060 Gm13813-201ENSMUST00000120998 787 ntBASIC12.79□□□□□ -0.36
HmgclP38060 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.79□□□□□ -0.36
HmgclP38060 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.79□□□□□ -0.36
HmgclP38060 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms