Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LdlrP35951 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LdlrP35951 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LdlrP35951 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LdlrP35951 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LdlrP35951 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
LdlrP35951 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LdlrP35951 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.95□□□□□ -0.34
LdlrP35951 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.95□□□□□ -0.34
LdlrP35951 Gm4984-201ENSMUST00000115987 360 ntBASIC12.95□□□□□ -0.34
LdlrP35951 Gm12341-201ENSMUST00000119724 503 ntBASIC12.95□□□□□ -0.34
LdlrP35951 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.95□□□□□ -0.34
LdlrP35951 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.95□□□□□ -0.34
LdlrP35951 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.95□□□□□ -0.34
LdlrP35951 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.95□□□□□ -0.34
LdlrP35951 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.95□□□□□ -0.34
LdlrP35951 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LdlrP35951 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LdlrP35951 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LdlrP35951 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LdlrP35951 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LdlrP35951 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.94□□□□□ -0.34
LdlrP35951 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LdlrP35951 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.94□□□□□ -0.34
LdlrP35951 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Mir1982-201ENSMUST00000157368 74 ntBASIC12.94□□□□□ -0.34
LdlrP35951 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.94□□□□□ -0.34
LdlrP35951 Gm17795-201ENSMUST00000214505 757 ntBASIC12.94□□□□□ -0.34
LdlrP35951 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.94□□□□□ -0.34
LdlrP35951 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Gm5161-201ENSMUST00000075243 853 ntBASIC12.94□□□□□ -0.34
LdlrP35951 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
LdlrP35951 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LdlrP35951 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.94□□□□□ -0.34
LdlrP35951 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LdlrP35951 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LdlrP35951 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.93□□□□□ -0.34
LdlrP35951 Gm27892-201ENSMUST00000185017 106 ntBASIC12.93□□□□□ -0.34
LdlrP35951 Mir7654-201ENSMUST00000185082 70 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms