Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.02□□□□□ -0.49
Foxa1P35582 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.02□□□□□ -0.49
Foxa1P35582 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.02□□□□□ -0.49
Foxa1P35582 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.02□□□□□ -0.49
Foxa1P35582 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.02□□□□□ -0.49
Foxa1P35582 Gm6266-201ENSMUST00000203844 806 ntBASIC12.02□□□□□ -0.49
Foxa1P35582 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Foxa1P35582 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Foxa1P35582 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Foxa1P35582 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Foxa1P35582 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.02□□□□□ -0.49
Foxa1P35582 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Foxa1P35582 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Foxa1P35582 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Foxa1P35582 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Foxa1P35582 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Foxa1P35582 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.01□□□□□ -0.49
Foxa1P35582 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Foxa1P35582 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Foxa1P35582 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Gm2231-201ENSMUST00000125661 612 ntBASIC12.01□□□□□ -0.49
Foxa1P35582 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.01□□□□□ -0.49
Foxa1P35582 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Foxa1P35582 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Gm29127-201ENSMUST00000188304 517 ntBASIC12.01□□□□□ -0.49
Foxa1P35582 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.01□□□□□ -0.49
Foxa1P35582 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.01□□□□□ -0.49
Foxa1P35582 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.01□□□□□ -0.49
Foxa1P35582 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.01□□□□□ -0.49
Foxa1P35582 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.01□□□□□ -0.49
Foxa1P35582 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Foxa1P35582 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.01□□□□□ -0.49
Foxa1P35582 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.01□□□□□ -0.49
Foxa1P35582 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Foxa1P35582 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Foxa1P35582 Gm44851-201ENSMUST00000205735 2309 ntBASIC12□□□□□ -0.49
Foxa1P35582 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12□□□□□ -0.49
Foxa1P35582 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Foxa1P35582 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms