Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thbs1P35441 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.07□□□□□ -0.48
Thbs1P35441 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Thbs1P35441 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Thbs1P35441 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Thbs1P35441 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.06□□□□□ -0.48
Thbs1P35441 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.06□□□□□ -0.48
Thbs1P35441 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.06□□□□□ -0.48
Thbs1P35441 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.06□□□□□ -0.48
Thbs1P35441 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Thbs1P35441 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.06□□□□□ -0.48
Thbs1P35441 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.06□□□□□ -0.48
Thbs1P35441 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.06□□□□□ -0.48
Thbs1P35441 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Thbs1P35441 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Thbs1P35441 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Thbs1P35441 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs1P35441 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.05□□□□□ -0.48
Thbs1P35441 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Thbs1P35441 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Thbs1P35441 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Thbs1P35441 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Thbs1P35441 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm12928-201ENSMUST00000117115 573 ntBASIC12.05□□□□□ -0.48
Thbs1P35441 Gm11478-201ENSMUST00000117851 599 ntBASIC12.05□□□□□ -0.48
Thbs1P35441 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm27701-201ENSMUST00000184498 110 ntBASIC12.05□□□□□ -0.48
Thbs1P35441 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.05□□□□□ -0.48
Thbs1P35441 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.05□□□□□ -0.48
Thbs1P35441 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Thbs1P35441 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Thbs1P35441 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms