Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Gm5161-201ENSMUST00000075243 853 ntBASIC13.32□□□□□ -0.28
Mmp13P33435 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp13P33435 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.31□□□□□ -0.28
Mmp13P33435 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.31□□□□□ -0.28
Mmp13P33435 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.31□□□□□ -0.28
Mmp13P33435 Gm15376-201ENSMUST00000122258 783 ntBASIC13.31□□□□□ -0.28
Mmp13P33435 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Gm26464-201ENSMUST00000157094 305 ntBASIC13.31□□□□□ -0.28
Mmp13P33435 Gm27701-201ENSMUST00000184498 110 ntBASIC13.31□□□□□ -0.28
Mmp13P33435 Gm28911-201ENSMUST00000188837 117 ntBASIC13.31□□□□□ -0.28
Mmp13P33435 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.31□□□□□ -0.28
Mmp13P33435 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp13P33435 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp13P33435 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.3□□□□□ -0.28
Mmp13P33435 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Mmp13P33435 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.3□□□□□ -0.28
Mmp13P33435 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.3□□□□□ -0.28
Mmp13P33435 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.3□□□□□ -0.28
Mmp13P33435 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.3□□□□□ -0.28
Mmp13P33435 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Mmp13P33435 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.3□□□□□ -0.28
Mmp13P33435 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp13P33435 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.29□□□□□ -0.28
Mmp13P33435 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.29□□□□□ -0.28
Mmp13P33435 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms