Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.88□□□□□ -0.03
Vcam1P29533 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Vcam1P29533 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Gm14109-201ENSMUST00000118814 309 ntBASIC14.88□□□□□ -0.03
Vcam1P29533 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.88□□□□□ -0.03
Vcam1P29533 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.88□□□□□ -0.03
Vcam1P29533 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Vcam1P29533 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.88□□□□□ -0.03
Vcam1P29533 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.88□□□□□ -0.03
Vcam1P29533 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.88□□□□□ -0.03
Vcam1P29533 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.88□□□□□ -0.03
Vcam1P29533 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.87□□□□□ -0.03
Vcam1P29533 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Vcam1P29533 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vcam1P29533 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.87□□□□□ -0.03
Vcam1P29533 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.87□□□□□ -0.03
Vcam1P29533 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vcam1P29533 Gm27046-201ENSMUST00000182160 463 ntBASIC14.87□□□□□ -0.03
Vcam1P29533 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.87□□□□□ -0.03
Vcam1P29533 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.87□□□□□ -0.03
Vcam1P29533 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vcam1P29533 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vcam1P29533 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.87□□□□□ -0.03
Vcam1P29533 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.87□□□□□ -0.03
Vcam1P29533 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcam1P29533 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vcam1P29533 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vcam1P29533 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vcam1P29533 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.86□□□□□ -0.03
Vcam1P29533 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vcam1P29533 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Vcam1P29533 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Vcam1P29533 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vcam1P29533 Gm16505-201ENSMUST00000179981 232 ntBASIC14.86□□□□□ -0.03
Vcam1P29533 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.86□□□□□ -0.03
Vcam1P29533 Gm3096-201ENSMUST00000185770 364 ntBASIC14.86□□□□□ -0.03
Vcam1P29533 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.86□□□□□ -0.03
Vcam1P29533 Gm5363-201ENSMUST00000211927 938 ntBASIC14.86□□□□□ -0.03
Vcam1P29533 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vcam1P29533 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Vcam1P29533 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vcam1P29533 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcam1P29533 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms