Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cbx3P23198 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.83□□□□□ -0.52
Cbx3P23198 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
Cbx3P23198 Gm17271-201ENSMUST00000165535 355 ntBASIC11.83□□□□□ -0.52
Cbx3P23198 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.83□□□□□ -0.52
Cbx3P23198 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.83□□□□□ -0.52
Cbx3P23198 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.83□□□□□ -0.52
Cbx3P23198 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.83□□□□□ -0.52
Cbx3P23198 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.83□□□□□ -0.52
Cbx3P23198 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.83□□□□□ -0.52
Cbx3P23198 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.83□□□□□ -0.52
Cbx3P23198 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.83□□□□□ -0.52
Cbx3P23198 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cbx3P23198 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.82□□□□□ -0.52
Cbx3P23198 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cbx3P23198 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cbx3P23198 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Gm11543-201ENSMUST00000120758 370 ntBASIC11.82□□□□□ -0.52
Cbx3P23198 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.82□□□□□ -0.52
Cbx3P23198 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cbx3P23198 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cbx3P23198 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.82□□□□□ -0.52
Cbx3P23198 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.82□□□□□ -0.52
Cbx3P23198 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cbx3P23198 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 BC043934-202ENSMUST00000185694 2356 ntBASIC11.82□□□□□ -0.52
Cbx3P23198 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cbx3P23198 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.81□□□□□ -0.52
Cbx3P23198 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.81□□□□□ -0.52
Cbx3P23198 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cbx3P23198 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.81□□□□□ -0.52
Cbx3P23198 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cbx3P23198 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Gm13597-201ENSMUST00000121239 375 ntBASIC11.81□□□□□ -0.52
Cbx3P23198 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.81□□□□□ -0.52
Cbx3P23198 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.81□□□□□ -0.52
Cbx3P23198 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Psmb5-202ENSMUST00000227257 622 ntBASIC11.81□□□□□ -0.52
Cbx3P23198 Gm7461-201ENSMUST00000058918 827 ntBASIC11.81□□□□□ -0.52
Cbx3P23198 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Cbx3P23198 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms