Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Gm45071-201ENSMUST00000205353 571 ntBASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Gm18905-201ENSMUST00000205454 928 ntBASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Gm19078-201ENSMUST00000206311 727 ntBASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm12384-201ENSMUST00000119228 919 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm11524-201ENSMUST00000119349 807 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Mir3547-201ENSMUST00000175461 88 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm7584-201ENSMUST00000175829 940 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm27516-201ENSMUST00000184237 98 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm29013-201ENSMUST00000187431 237 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm18351-201ENSMUST00000188646 883 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm43822-201ENSMUST00000200285 476 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf9P20334 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tnfrsf9P20334 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tnfrsf9P20334 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Tnfrsf9P20334 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tnfrsf9P20334 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tnfrsf9P20334 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tnfrsf9P20334 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Tnfrsf9P20334 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms