Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm18041-201ENSMUST00000218210 618 ntBASIC12.48□□□□□ -0.41
Cntn1P12960 Gm19163-201ENSMUST00000223313 780 ntBASIC12.48□□□□□ -0.41
Cntn1P12960 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.48□□□□□ -0.41
Cntn1P12960 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cntn1P12960 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cntn1P12960 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cntn1P12960 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cntn1P12960 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cntn1P12960 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cntn1P12960 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cntn1P12960 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cntn1P12960 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cntn1P12960 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.48□□□□□ -0.41
Cntn1P12960 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
Cntn1P12960 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cntn1P12960 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.47□□□□□ -0.41
Cntn1P12960 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Gm6222-202ENSMUST00000182143 629 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Gm19309-201ENSMUST00000218295 205 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.47□□□□□ -0.41
Cntn1P12960 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.47□□□□□ -0.41
Cntn1P12960 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cntn1P12960 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cntn1P12960 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cntn1P12960 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.46□□□□□ -0.41
Cntn1P12960 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cntn1P12960 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.46□□□□□ -0.41
Cntn1P12960 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.46□□□□□ -0.41
Cntn1P12960 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.46□□□□□ -0.41
Cntn1P12960 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cntn1P12960 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cntn1P12960 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cntn1P12960 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.46□□□□□ -0.41
Cntn1P12960 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.46□□□□□ -0.41
Cntn1P12960 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.46□□□□□ -0.41
Cntn1P12960 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.46□□□□□ -0.41
Cntn1P12960 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.46□□□□□ -0.41
Cntn1P12960 Gm6013-201ENSMUST00000212264 699 ntBASIC12.46□□□□□ -0.41
Cntn1P12960 Gm7399-201ENSMUST00000032395 858 ntBASIC12.46□□□□□ -0.41
Cntn1P12960 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cntn1P12960 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cntn1P12960 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms