Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.74■□□□□ 0.27
Hoxc9P09633 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc9P09633 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hoxc9P09633 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc9P09633 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc9P09633 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.74■□□□□ 0.27
Hoxc9P09633 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hoxc9P09633 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc9P09633 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc9P09633 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Gm6963-201ENSMUST00000147879 379 ntBASIC16.73■□□□□ 0.27
Hoxc9P09633 Gm22902-201ENSMUST00000158488 302 ntBASIC16.73■□□□□ 0.27
Hoxc9P09633 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Hoxc9P09633 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.73■□□□□ 0.27
Hoxc9P09633 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hoxc9P09633 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.73■□□□□ 0.27
Hoxc9P09633 Gm37986-201ENSMUST00000193285 383 ntBASIC16.73■□□□□ 0.27
Hoxc9P09633 Rprl1-202ENSMUST00000198476 238 ntBASIC16.73■□□□□ 0.27
Hoxc9P09633 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.73■□□□□ 0.27
Hoxc9P09633 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc9P09633 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Hoxc9P09633 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.73■□□□□ 0.27
Hoxc9P09633 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.72■□□□□ 0.27
Hoxc9P09633 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Hoxc9P09633 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.72■□□□□ 0.27
Hoxc9P09633 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hoxc9P09633 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.72■□□□□ 0.27
Hoxc9P09633 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Hoxc9P09633 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc9P09633 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Gm12015-201ENSMUST00000117065 843 ntBASIC16.71■□□□□ 0.27
Hoxc9P09633 Gm13296-201ENSMUST00000117854 997 ntBASIC16.71■□□□□ 0.27
Hoxc9P09633 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Gm11597-201ENSMUST00000121423 964 ntBASIC16.71■□□□□ 0.27
Hoxc9P09633 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.71■□□□□ 0.27
Hoxc9P09633 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Gm5070-201ENSMUST00000177599 862 ntBASIC16.71■□□□□ 0.27
Hoxc9P09633 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Gm28882-201ENSMUST00000185504 314 ntBASIC16.71■□□□□ 0.27
Hoxc9P09633 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms