Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Gm3756-201ENSMUST00000169182 1355 ntBASIC19.27■□□□□ 0.68
NclP09405 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NclP09405 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NclP09405 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NclP09405 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC19.27■□□□□ 0.67
NclP09405 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
NclP09405 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Snord83b-201ENSMUST00000104546 94 ntBASIC19.26■□□□□ 0.67
NclP09405 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC19.26■□□□□ 0.67
NclP09405 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC19.26■□□□□ 0.67
NclP09405 AC132384.14-201ENSMUST00000219346 1147 ntBASIC19.26■□□□□ 0.67
NclP09405 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Gm44065-201ENSMUST00000203184 3527 ntBASIC19.26■□□□□ 0.67
NclP09405 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NclP09405 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NclP09405 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Gm12502-201ENSMUST00000120197 444 ntBASIC19.25■□□□□ 0.67
NclP09405 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC19.25■□□□□ 0.67
NclP09405 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC19.25■□□□□ 0.67
NclP09405 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Gm2991-201ENSMUST00000173338 480 ntBASIC19.25■□□□□ 0.67
NclP09405 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Gm9061-201ENSMUST00000182707 1006 ntBASIC19.25■□□□□ 0.67
NclP09405 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC19.25■□□□□ 0.67
NclP09405 CT009713.10-202ENSMUST00000225734 696 ntBASIC19.25■□□□□ 0.67
NclP09405 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
NclP09405 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NclP09405 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NclP09405 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC19.24■□□□□ 0.67
NclP09405 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NclP09405 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC19.24■□□□□ 0.67
NclP09405 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC19.24■□□□□ 0.67
NclP09405 Gm7895-201ENSMUST00000187459 1173 ntBASIC19.24■□□□□ 0.67
NclP09405 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NclP09405 Gm6621-201ENSMUST00000193251 772 ntBASIC19.24■□□□□ 0.67
NclP09405 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC19.24■□□□□ 0.67
NclP09405 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NclP09405 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NclP09405 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NclP09405 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NclP09405 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NclP09405 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NclP09405 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NclP09405 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NclP09405 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NclP09405 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NclP09405 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC19.23■□□□□ 0.67
NclP09405 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC19.23■□□□□ 0.67
NclP09405 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NclP09405 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NclP09405 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC19.23■□□□□ 0.67
NclP09405 Gm8099-201ENSMUST00000200510 742 ntBASIC19.23■□□□□ 0.67
NclP09405 Gm43416-201ENSMUST00000201916 1015 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms